https://packages.gentoo.org/categories/sci-biology/outdated 2026-08-11T23:32:40Z Gentoo Packages Database sci-biology/abyss

Version 2.3.10 is available, while the latest version in the Gentoo tree is 2.3.4.

sci-biology/bcftools

Version 1.24 is available, while the latest version in the Gentoo tree is 1.23.1.

sci-biology/bioperl

Version 1.7.8 is available, while the latest version in the Gentoo tree is 1.6.9-r1.

sci-biology/bioperl-network

Version 1.6.902 is available, while the latest version in the Gentoo tree is 1.6.9-r1.

sci-biology/bioperl-run

Version 1.7.3 is available, while the latest version in the Gentoo tree is 1.6.9-r1.

sci-biology/blat

Version 37 is available, while the latest version in the Gentoo tree is 34-r3.

sci-biology/bowtie

Version 2.5.5 is available, while the latest version in the Gentoo tree is 2.5.1.

sci-biology/bwa

Version 0.7.19 is available, while the latest version in the Gentoo tree is 0.7.17.

sci-biology/cd-hit

Version 4.8.1 is available, while the latest version in the Gentoo tree is 4.6.6-r1.

sci-biology/clustalw-mpi

Version 0.15 is available, while the latest version in the Gentoo tree is 0.13-r3.

sci-biology/exonerate

Version 2.4.0 is available, while the latest version in the Gentoo tree is 2.2.0-r3.

sci-biology/fastx_toolkit

Version 0.0.14.6 is available, while the latest version in the Gentoo tree is 0.0.14-r1.

sci-biology/foldingathome

Version 8.5.6 is available, while the latest version in the Gentoo tree is 7.6.21.

sci-biology/infernal

Version 1.1.5 is available, while the latest version in the Gentoo tree is 1.0.2-r1.

sci-biology/kalign

Version 3.5.1 is available, while the latest version in the Gentoo tree is 2.03-r3.

sci-biology/kallisto

Version 0.52.0 is available, while the latest version in the Gentoo tree is 0.46.2-r1.

sci-biology/libgtextutils

Version 0.7.2 is available, while the latest version in the Gentoo tree is 0.6.1-r1.

sci-biology/mafft

Version 7.526 is available, while the latest version in the Gentoo tree is 7.525.

sci-biology/mothur

Version 1.48.6 is available, while the latest version in the Gentoo tree is 1.48.2.

sci-biology/mrbayes

Version 3.2.7a is available, while the latest version in the Gentoo tree is 3.2.7.

sci-biology/mummer

Version 4.0.1 is available, while the latest version in the Gentoo tree is 3.23-r1.

sci-biology/muscle

Version 5.3 is available, while the latest version in the Gentoo tree is 5.1.0.

sci-biology/samtools

Version 1.24 is available, while the latest version in the Gentoo tree is 1.23.1.

sci-biology/seaview

Version 5.1 is available, while the latest version in the Gentoo tree is 4.6-r2.

sci-biology/seqan

Version 3.4.2 is available, while the latest version in the Gentoo tree is 3.1.0.

sci-biology/sim4

Version 20121010 is available, while the latest version in the Gentoo tree is 20030921-r2.

sci-biology/STAR

Version 2.7.11b is available, while the latest version in the Gentoo tree is 2.7.10a.

sci-biology/t-coffee

Version 12.00 is available, while the latest version in the Gentoo tree is 11.00-r3.

sci-biology/trf

Version 4.09.1 is available, while the latest version in the Gentoo tree is 4.04-r2.

sci-biology/trnascan-se

Version 2.0.13 is available, while the latest version in the Gentoo tree is 1.31-r3.

sci-biology/ucsc-genome-browser

Version 501 is available, while the latest version in the Gentoo tree is 260-r2.

sci-biology/vcftools

Version 0.1.17 is available, while the latest version in the Gentoo tree is 0.1.16.

sci-biology/wise

Version 2.4.1 is available, while the latest version in the Gentoo tree is 2.4.0_alpha-r1.