| circos | Circular layout visualization of genomic and other data |
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| dash | Python framework for building ML & data science web apps |
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| epix | 2- and 3-D plotter for creating images (to be used in LaTeX) |
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| fig2sxd | Utility to convert files in xfig format to OpenOffice.org Draw format |
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| fityk | General-purpose nonlinear curve fitting and data analysis |
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| g3data | Tool for extracting data from graphs |
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| gcalc | Java Mathematical Graphing System |
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| ggobi | Visualization program for exploring high-dimensional data |
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| gle | Graphics Layout Engine |
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| gnuplot | Command-line driven interactive plotting program |
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| gr | Universal framework for cross-platform visualization applications |
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| grace | Motif based XY-plotting tool |
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| gwyddion | Framework for Scanning Mode Microscopy data analysis |
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| kst | Fast real-time large-dataset viewing and plotting tool |
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| labplot | Scientific data analysis and visualisation based on KDE Frameworks |
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| paraview | Powerful scientific data visualization application |
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| pythonprop | Scripts to prepare and plot VOACAP propagation predictions |
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| quickplot | A fast interactive 2D plotter |
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| spyview | 2D and 3D data visualization and analysis program |
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| veusz | Qt scientific plotting package with good Postscript output |
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| xd3d | Scientific visualization tool |
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| xgraph | X11 Plotting Utility |
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| xyscan | Tool for extracting data points from graphs |
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Packages