sci-biology/

ucsc-genome-browser

Bug Reports

• sci-biology/ucsc-genome-browser-260-r1 does not respect LDFLAGS

  339557 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser-260-r1 - [clang] ./tfbsConsLoc.c: error: call to undeclared function do_revcomp; ISO C99

  919200 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser-260-r1 fails to compile (GCC-14-SYSTEM): tfbsConsLoc.c:23:53: error: passing argument 6 of get_args from incompatible pointer type [-Wincompatible-pointer-types]

  921261 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser-260-r1 fails to compile: orthoEvaluate.c:310:2: error: non-void function agxSupportForEdge should return a value [-Wreturn-type]

  831491 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser-260-r1 - * ERROR: sci-biology/ucsc-genome-browser-260-r1::gentoo failed (install phase):

  776877 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser-260-r1: cpio: command not found

  688748 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser calls ar directly

  725328 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser-260-r1 : fof.c: error: arithmetic on pointer to an incomplete type

  716078 - Assigned to Gentoo musl team
• sci-biology/ucsc-genome-browser-260: tries to link libpng.a and fails (due to missing -lm)

  438636 - Assigned to Gentoo Science Biology related packages
• sci-biology/ucsc-genome-browser: add -fPIC to CFLAGS and USE=+static-libs

  402835 - Assigned to Gentoo Science Biology related packages