Gentoo Developer

Matthias Maier

Bug Reports

• dev-cpp/kokkos-3.7.1 : /.../Kokkos_Stacktrace.cpp: fatal error: execinfo.h: No such file or directory

  712748 - Assigned to Gentoo musl team
• dev-util/astyle-3.1-r2 : astyle_main.cpp: error: PATH_MAX was not declared in this scope

  713644 - Assigned to Gentoo musl team
• app-crypt/sbsigntools-0.9.5 calls ar directly

  718124 - Assigned to Matthias Maier
• sys-firmware/vgabios calls cc directly

  721592 - Assigned to Matthias Maier
• sci-libs/gmsh License appears to be incorrect

  723788 - Assigned to Licenses team
• sci-mathematics/petsc-3.16.0 calls ar directly

  725626 - Assigned to Matthias Maier
• app-text/barcode-0.99-r1 fails to compile: ld.lld: error: undefined symbol: rpl_calloc

  729520 - Assigned to Matthias Maier
• sci-libs/dealii-9.4.1-r1 installs compressed files (manpages, documentation)

  731918 - Assigned to Matthias Maier
• app-crypt/sbsigntools fails test: ...llvm-objcopy: error: invalid output format: 'efi-app-x86_64'

  733016 - Assigned to Matthias Maier
• dev-util/numdiff-5.9.0 QA Notice: Colliding files found by ecompress

  749897 - Assigned to Matthias Maier
• dev-lang/julia-bin-1.8.3 installs files with unresolved SONAME dependencies

  764095 - Assigned to Matthias Maier
• sys-firmware/edk2-ovmf-202008[-binary] with ld.gold: fatal error: -pie and -static are incompatible

  768255 - Assigned to Matthias Maier
• media-libs/virglrenderer-0.10.4 fails to compile with dev-lang/python-exec[-native-symlinks]

  769686 - Assigned to Matthias Maier
• sci-libs/trilinos-13.0.1 calls python directly (dev-lang/python-exec[-native-symlinks])

  776391 - Assigned to Matthias Maier
• sci-mathematics/dsfmt-2.2.4 fails tests

  780933 - Assigned to Gentoo Science Related Packages
• dev-lang/julia-1.6.0 build fails due to a missing library dependence in libsuitesparseconfig.so

  781242 - Assigned to Gentoo Science Related Packages
• dev-lang/julia: enable polly and polly-openmp support for automatic parallelization

  784245 - Assigned to Gentoo Science Related Packages
• dev-lang/julia-1.8.5-r1 does not respect CFLAGS/LDFLAGS

  788943 - Assigned to Gentoo Science Related Packages
• dev-lang/julia-1.8.5-r1 installs files that contain writable and executable sections

  788946 - Assigned to Gentoo Science Related Packages
• sci-visualization/paraview license review

  789552 - Assigned to Licenses team
• app-emulation/qemu-guest-agent-6.0.0 - /.../nbd.c:210: undefined reference to unknown_lock_type

  790677 - Assigned to John Helmert III
• dev-lang/julia-1.6.0 when compiled with -D_GLIBCXX_ASSERTIONS: signal (6): Aborted in expression starting at none:0 gsignal at /lib64/libc.so.6

  792744 - Assigned to Gentoo Science Related Packages
• app-emulation/qemu-guest-agent-6.0.0 - ERROR: GNU make (make LIBTOOL=rdlibtool) not found

  795750 - Assigned to John Helmert III
• app-emulation/qemu-guest-agent-6.0.0 fails tests

  801679 - Assigned to John Helmert III
• media-sound/quodlibet-4.6.0 does not enable tests

  808723 - Assigned to Matthias Maier
• app-emulation/qemu-guest-agent-6.0.0 - ../.../ssh.c: fatal error: libssh/sftp.h: No such file or directory

  808837 - Assigned to John Helmert III
• app-emulation/qemu-guest-agent-6.0.0 startup script shows no error despite failure

  810628 - Assigned to John Helmert III
• dev-lang/julia-1.6.3-r1 fails tests

  814806 - Assigned to Gentoo Science Related Packages
• dev-lang/julia-1.6.3 calls gfortran directly

  814809 - Assigned to Gentoo Science Related Packages
• sci-libs/ginkgo-1.4.0 - configure fails: Could not find a package configuration file provided by "hipblas"

  814845 - Assigned to Matthias Maier
• dev-lang/mmix-20160804-r1 - mmix-mem.w: fatal error: mmix-pipe.h: No such file or directory

  818889 - Assigned to Matthias Maier
• sci-libs/trilinos-14.4.0 installs files that contain insecure RUNPATHs

  823434 - Assigned to Matthias Maier
• dev-util/cppcheck-2.4.1 calls python directly (dev-lang/python-exec[-native-symlinks])

  826602 - Assigned to Matthias Maier
• dev-util/cppcheck-2.9 does not enable tests

  826970 - Assigned to Matthias Maier
• sci-libs/gmsh: bundles dev-cpp/picojson

  828029 - Assigned to Matthias Maier
• app-emulation/qemu-guest-agent-6.0.0 - /.../ld: .../virgl.c.o: undefined reference to symbol epoxy_glFlush

  828422 - Assigned to John Helmert III
• sci-libs/trilinos-13.0.1-r1 - CMake Error at .../TribitsProcessEnabledTpl.cmake:144 (MESSAGE):

  828423 - Assigned to Matthias Maier
• sci-libs/dealii-9.4.1-r1 installs files into unexpected paths

  829143 - Assigned to Matthias Maier
• app-emulation/qemu-guest-agent-6.0.0 - ../.../fuse.c: error: FALLOC_FL_ZERO_RANGE undeclared (first use in this function)

  829448 - Assigned to Gentoo musl team
• dev-lang/julia-1.8.5-r1 fails to compile: Make.inc:1207: "Attempting to build OpenBLAS or SuiteSparse without a functioning fortran compiler!"

  830570 - Assigned to Gentoo Science Related Packages
• sci-libs/trilinos-13.4.0-r3 - /.../Kokkos_Stacktrace.cpp: fatal error: execinfo.h: No such file or directory

  830687 - Assigned to Gentoo musl team
• dev-lang/julia-bin-1.7.3 installs files with unresolved SONAME dependencies (on MUSL)

  830819 - Assigned to Matthias Maier
• app-emulation/qemu-guest-agent-6.0.0 needs sys-libs/liburing which isn't included in it's dependencies

  831209 - Assigned to John Helmert III
• sci-libs/dealii-9.3.1-r4 fails to compile: llvm issue?

  831723 - Assigned to Matthias Maier
• dev-util/astyle-3.1-r2 - astyle_main.h: fatal error: jni.h: No such file or directory

  831834 - Assigned to Matthias Maier
• app-misc/hello-2.11 fails tests on MUSL: FAIL: atexit-1 multibyte-1

  833874 - Assigned to Gentoo musl team
• app-emulation/qemu-guest-agent-6.0.0 - /.../block-backend.c:2397: undefined reference to unknown_lock_type

  833998 - Assigned to Matthias Maier
• dev-lang/julia-1.7.1-r4 hangs during install

  835629 - Assigned to Gentoo Science Related Packages
• dev-lang/julia-bin: uses variables banned in scope (VariableScope)

  836051 - Assigned to Matthias Maier
• sci-libs/p4est-2.8-r1 installs files into unexpected paths

  837044 - Assigned to Matthias Maier
• sci-libs/dealii-9.3.3 - CMake Error at .../macro_configure_feature.cmake:196 (MESSAGE):

  839495 - Assigned to Matthias Maier
• app-text/barcode-0.99-r1 installs libtool files (.la) without corresponding static libraries

  841869 - Assigned to Matthias Maier
• sci-mathematics/petsc-3.17.1 installs more files with FEATURES=test

  847634 - Assigned to Matthias Maier
• sci-mathematics/slepc-3.17.1 installs more files with FEATURES=test

  847637 - Assigned to Matthias Maier
• sci-mathematics/petsc-3.17.1 provide petsc4py

  847922 - Assigned to Matthias Maier
• sci-libs/trilinos-13.4.0 fails to compile: rm: cannot remove TrilinosRepoVersion.txt: No such file or directory

  851486 - Assigned to Matthias Maier
• sci-libs/trilinos-14.2.0 one or more CMake variables were not used by the project

  851489 - Assigned to Matthias Maier
• sci-libs/ginkgo-1.4.0-r3 fails to compile (lto): extended_float.hpp:321:61: error: dereferencing type-punned pointer will break strict-aliasing rules [-Werror=strict-aliasing]

  862705 - Assigned to Matthias Maier
• sci-libs/gmsh-4.10.3 fails to compile (lto): safe_io.c:953: error: type of write does not match original declaration [-Werror=lto-type-mismatch]

  862711 - Assigned to Matthias Maier
• sci-libs/trilinos-13.4.0-r3 fails to compile (lto): DD_Memory.h:61:13: error: type of [-Werror=lto-type-mismatch]

  862987 - Assigned to Matthias Maier
• sci-mathematics/petsc-3.17.1-r1 fails to compile (lto): zstart.c:111:19: error: type of petscgetcommandargument_ does not match original declaration [-Werror=lto-type-mismatch]

  863260 - Assigned to Matthias Maier
• dev-cpp/taskflow-3.3.0 fails tests (MUSL)

  864172 - Assigned to Matthias Maier
• dev-lang/julia-1.7.3 fails to compile (lto): julia_internal.h:159:26: error: type of jl_cumulative_compile_time does not match original declaration [-Werror=lto-type-mismatch]

  866593 - Assigned to Gentoo Science Related Packages
• dev-util/cppcheck-2.9 fails tests: TestProcessExecutor - TestThreadExecutor

  867364 - Assigned to Matthias Maier
• sci-libs/gmsh-4.10.3 python bindings not found

  867520 - Assigned to Matthias Maier
• sys-fs/mp3fs-1.1.1-r4 calls ar directly

  869656 - Assigned to Matthias Maier
• sys-firmware/seabios-1.16.0 fails to compile: FileNotFoundError: [Errno 2] No such file or directory: acpi-dsdt.dsl.i.orig

  873136 - Assigned to Matthias Maier
• games-board/stockfish-15.1: benchmark.cpp:(.text+0xc5): undefined reference to `__llvm_profile_instrument_memop'

  874564 - Assigned to Matthias Maier
• dev-cpp/kokkos-3.7.0 fails tests: 4 - KokkosCore_UnitTest_LogicalSpaces (Failed)

  877527 - Assigned to Matthias Maier
• app-crypt/efitools-1.9.2-r1 - make: [Make.rules:121: KeyTool-signed.efi]<snip> Segmentation fault

  881329 - Assigned to Matthias Maier
• dev-cpp/kokkos-3.7.0 installs files that contain insecure RUNPATHs

  883245 - Assigned to Matthias Maier
• dev-lang/mmix-20160804-r1 - abstime.w: error: type specifiermmix-arith.w missing,: 666defaults: 6to: int;warning: aISO functionC99

  883275 - Assigned to Matthias Maier
• dev-lang/julia-1.8.5-r1 one or more CMake variables were not used by the project

  885435 - Assigned to Gentoo Science Related Packages
• app-emulation/qemu-guest-agent-7.1.0 fails test - ERROR:../.../test-crypto-secret.c:144:test_secret_keyring_good: assertion failed

  885673 - Assigned to John Helmert III
• app-crypt/sbsigntools-0.9.4 fails to compile (DASH-SYSTEM): x509: Error on line 1 of config file "ca.cnf"

  885889 - Assigned to Matthias Maier
• sci-visualization/paraview-5.11.0_rc2-r1 overwrites user's optimization (-O*)

  886323 - Assigned to Matthias Maier
• sys-firmware/seabios-1.16.0 fails to compile with clang: error: unknown argument: -mpreferred-stack-boundary=2

  887115 - Assigned to Matthias Maier
• sci-mathematics/petsc-3.18.2 fails tests: Possible error running C++ ex19 with 1 MPI process

  888731 - Assigned to Matthias Maier
• sci-mathematics/slepc-3.18.1 fails tests

  888733 - Assigned to Matthias Maier
• sys-firmware/ipxe-1.21.1 needs x86_64 uefi binaries built

  888827 - Assigned to Matthias Maier
• dev-util/numdiff-5.9.0 fails to compile (DASH-SYSTEM): sh: 1: [: yes: unexpected operator

  888833 - Assigned to Matthias Maier
• sci-visualization/paraview-5.11.0_rc2-r1: file collision with sci-libs/vtk-9.2.2

  889340 - Assigned to Matthias Maier
• sci-mathematics/petsc-3.18.2 - econf failed

  890074 - Assigned to Matthias Maier
• dev-lang/julia-1.8.3-r2 missing libopenblas64_.so file to use Arpack_jll

  890166 - Assigned to Matthias Maier
• dev-util/astyle-3.1-r2 depend on obsolete JAVA ABI virtual/jdk-1.6

  891827 - Assigned to Matthias Maier
• dev-lang/julia-1.8.3-r4 fails to compile: System library symlink failure: Unable to locate libspqr.so on your system!

  894190 - Assigned to Matthias Maier
• dev-cpp/kokkos-3.7.1 - /.../Kokkos_MemoryPool.cpp: error: block_size_lg2 was not declared in this scope

  895146 - Assigned to Matthias Maier
• sci-libs/trilinos-13.4.1 fails to compile (MUSL-CLANG-SYSTEM): trilinos_klu_factor.c:506:19: error: call to undeclared function omp_get_num_threads; ISO C99 and later do not support implicit function declarations [-Wimplicit-function-declaration]

  898272 - Assigned to Matthias Maier
• sci-libs/gmsh-4.10.3 fails to compile (MUSL-CLANG-SYSTEM): edgegen.c:1680:18: error: call to undeclared library function strlen with type unsigned long (const char ); ISO C99 and later do not support implicit function declarations [-Wimplicit-function-de

  898280 - Assigned to Matthias Maier
• sci-mathematics/petsc-3.18.2 fails to compile (MUSL-CLANG-SYSTEM): gmake[3]: No rule to make target w

  898416 - Assigned to Matthias Maier
• sci-mathematics/petsc-3.18.2 - gmake[3]: No rule to make target w. Stop.

  898476 - Assigned to Matthias Maier
• app-emulation/qemu-guest-agent-8.0.0 has implicit function declarations in configure logs (MUSL-CLANG-SYSTEM)

  900330 - Assigned to John Helmert III
• app-misc/hello-2.11 has implicit function declarations in configure logs (MUSL-CLANG-SYSTEM)

  900471 - Assigned to Matthias Maier
• sci-visualization/paraview-5.11.1 one or more CMake variables were not used by the project

  904731 - Assigned to Matthias Maier
• sci-visualization/paraview-5.11.1 has implicit function declarations in configure logs

  904732 - Assigned to Matthias Maier
• sci-visualization/paraview-5.11.1 - /.../proj_json_streaming_writer.cpp: error: GIntBig was not declared in this scope

  904746 - Assigned to Matthias Maier
• dev-lang/julia-1.8.5-r1 adds -Werror flag on its own

  905448 - Assigned to Matthias Maier
• app-emulation/libvirt-9.3.0 fails tests (MUSL-SYSTEM)

  906167 - Assigned to Matthias Maier
• dev-lang/julia-1.8.5-r1 fails to compile (MUSL-SYSTEM): raw_ostream.cpp:807:11: error: ::lseek64 has not been declared

  906355 - Assigned to Matthias Maier
• app-doc/doxygen-1.9.7: bundled dev-libs/spdlog

  906848 - Assigned to Matthias Maier
• app-doc/doxygen-1.9.7-r1 installs files into unexpected paths

  906860 - Assigned to Matthias Maier
• dev-python/magic-wormhole: fails tests with pytest-describe installed

  907117 - Assigned to Matthias Maier
• >=sci-mathematics/petsc-3.16.0[mpi]: sandbox violation during configure to /dev/dri/renderD128

  907222 - Assigned to Matthias Maier
• app-doc/doxygen-1.9.7-r1 fails test - 61 - 061_Únicod€_file (Failed)

  907904 - Assigned to Matthias Maier
• app-doc/doxygen-1.9.6 (with USE=+doc) fails with: error: Failed to extract bounding box from generated diagram file /var/tmp/portage/app-doc/doxygen-1.9.6/work/doxygen-1.9.6_build/latex/examples/diagrams/latex/class_a__coll__graph.pdf

  907951 - Assigned to Matthias Maier
• app-emulation/qemu-guest-agent-8.0.0 - ninja: build stopped: subcommand failed.

  908699 - Assigned to John Helmert III
• =sci-libs/trilinos-14.0.0: optimization CXXFLAGS not respected

  908835 - Assigned to Matthias Maier
• media-sound/quodlibet: needs to use PEP517 build (DistutilsNonPEP517Build)

  909994 - Assigned to Matthias Maier
• sci-visualization/paraview-5.11.1 requires qtdeclarative with -webengine

  910104 - Assigned to Matthias Maier
• sci-visualization/paraview-5.11.1 fails to compile (PYTHON-3.12-SYSTEM): proj_json_streaming_writer.hpp:42:14: error: int64_t in namespace std does not name a type

  910541 - Assigned to Matthias Maier
• dev-python/magic-wormhole requires old dev-python/magic-wormhole-transit-relay

  911131 - Assigned to Matthias Maier
• dev-lang/julia-1.8.5-r1 sandbox violation (PYTHON-3.12-SYSTEM)

  911162 - Assigned to Matthias Maier
• dev-util/cppcheck-2.11 bump request

  911256 - Assigned to Matthias Maier
• app-emulation/libvirt-9.4.0-r3 UEFI VMs cannot start with AppArmor enabled

  911786 - Assigned to Matthias Maier
• app-doc/doxygen-1.9.7-r1 hitting "input buffer overflow, can't enlarge buffer because scanner uses REJECT"

  912261 - Assigned to Matthias Maier
• app-doc/doxygen-1.9.7-r1 +doc installs SVG files in .bz2 form

  913584 - Assigned to Matthias Maier
• dev-lang/julia-1.9.3: version bump

  914841 - Assigned to Matthias Maier

Stabilization Bug Reports

• dev-cpp/kokkos-4.0.1 stabilisation, cleanup old

  911331 - Assigned to Matthias Maier
• media-sound/quodlibet-4.6.0: please stabilize

  914734 - Assigned to Gentoo Sound Team
• app-shells/gentoo-zsh-completions-20230117: stablereq

  915172 - Assigned to Matthias Maier

Keywording Bug Reports

• app-emulation/virt-manager: add ~riscv keyword (WIP)

  859625 - Assigned to Virtualization Team
• app-emulation/libvirt: enable support for riscv arch (WIP)

  859703 - Assigned to Matthias Maier
• media-gfx/freecad (and dependencies): arm64 keywording

  881653 - Assigned to Bernd
• dev-python/scikit-build-core: keywording

  909029 - Assigned to Python Gentoo Team
• games-board/stockfish ~arm64 keywording request

  909638 - Assigned to Matthias Maier
• app-doc/doxygen: rekeywording

  914585 - Assigned to Matthias Maier