| taucs |
C library of sparse linear solvers |
| silo |
A mesh and field I/O library and scientific database |
| scotch |
Software for graph, mesh and hypergraph partitioning |
| blis |
BLAS-like Library Instantiation Software Framework |
| matio |
Library for reading and writing matlab files |
| orocos-bfl |
Bayesian Filtering Library |
| profphd-utils |
Additional utils for profphd |
| openlibm |
High quality system independent, open source libm |
| volk |
vector optimized library of kernels |
| lemon |
C++ template static library of common data structures and algorithms |
| coinor-clp |
COIN-OR linear programming solver |
| oc |
Network Data Access Protocol client C library |
| openblas |
Optimized BLAS library based on GotoBLAS2 |
| libpdb |
PDB Record I/O Libraries -- c version |
| coinor-cppad |
COIN-OR C++ Algorithmic Differentiation |
| fftw |
Fast C library for the Discrete Fourier Transform |
| flann |
Fast approximate nearest neighbor searches in high dimensional spaces |
| octomap |
An Efficient Probabilistic 3D Mapping Framework Based on Octrees |
| liborigin |
Library for reading OriginLab OPJ project files |
| nemesis |
Enhancement to the EXODUSII finite element database model |
| mpfi |
Multiple precision interval arithmetic library based on MPFR |
| netcdf-cxx |
C++ library for netCDF |
| ogdi |
Open Geographical Datastore Interface, a GIS support library |
| opencascade |
Development platform for CAD/CAE, 3D surface/solid modeling and data exchange |
| coinor-bcps |
COIN-OR BiCEPS data handling library |
| levmar |
Levenberg-Marquardt nonlinear least squares C library |
| netcdf |
Scientific library and interface for array oriented data access |
| cmpfit |
MINPACK-1 Least Squares Fitting Library in C |
| libnova |
Celestial Mechanics and Astronomical Calculation Library |
| minuit |
A C++ physics analysis tool for function minimization |
| mkl |
Intel(R) Math Kernel Library: linear algebra, fft, math functions |
| klu |
Sparse LU factorization for circuit simulation |
| suitesparse |
Meta package for a suite of sparse matrix tools |
| tamu_anova |
ANOVA Extensions to the GNU Scientific Library |
| netcdf-fortran |
Scientific library and interface for array oriented data access |
| libint |
Matrix elements (integrals) evaluation over Cartesian Gaussian functions |
| libmems |
Library for sci-biology/mauve |
| lapack |
BLAS,CBLAS,LAPACK,LAPACKE reference implementations |
| shapelib |
Library for manipulating ESRI Shapefiles |
| shogun |
Large Scale Machine Learning Toolbox |
| libmuscle |
Library for sci-biology/mauve |
| libh2oxx |
C++ bindings for libh2o |
| lapack-reference |
Reference implementation of LAPACK |
| alglib |
Numerical analysis and data processing library |
| libghemical |
Chemical quantum mechanics and molecular mechanics |
| libgeodecomp |
An auto-parallelizing library to speed up computer simulations |
| libdap |
Implementation of a C++ SDK for DAP 2.0 and 3.2 |
| m4ri |
Method of four russian for inversion (M4RI) |
| galib |
Library for genetic algorithms in C++ programs |
| fetk |
The Finite Element ToolKit - Meta package |
| libqalculate |
A modern multi-purpose calculator library |
| libticalcs2 |
Library for communication with TI calculators |
| oce |
Development platform for CAD/CAE, 3D surface/solid modeling and data exchange |
| plotmm |
Plot widget for GTKmm |
| cminpack |
C implementation of the MINPACK nonlinear optimization library |
| libspatialindex |
General framework for developing spatial indices |
| libticonv |
Charset conversion library for TI calculators |
| mathgl |
Math Graphics Library |
| nlopt |
Non-linear optimization library |
| numkit |
Numerical first aid kit (with numpy/scipy) |
| o2scl |
Object-oriented Scientific Computing Library |
| nfft |
library for nonequispaced discrete Fourier transformations |
| pyshp |
Pure Python read/write support for ESRI Shapefile format |
| qd |
Quad-double and double-double float arithmetics |
| qfits |
ESO stand-alone C library offering easy access to FITS files |
| chemkit |
Library for chemistry applications |
| libpdb++ |
PDB Record I/O Libraries -- c++ version |
| mc |
2D/3D AFEM code for nonlinear geometric PDE |
| ufconfig |
Common configuration scripts for the SuiteSparse libraries |
| umfpack |
Unsymmetric multifrontal sparse LU factorization library |
| voro++ |
A 3D Voronoi cell software library |
| votca-tools |
Votca tools library |
| Rtree |
R-Tree spatial index for Python GIS |
| Shapely |
Geometric objects, predicates, and operations |
| ViSP |
Visual Servoing Platform: visual tracking and visual servoing library |
| adolc |
Automatic differentiation system for C/C++ |
| udunits |
Library for manipulating units of physical quantities |
| bmrblib |
API abstracting the BioMagResBank (BMRB) NMR-STAR format |
| cholmod |
Sparse Cholesky factorization and update/downdate library |
| cifparse-obj |
Provides an object-oriented application interface to information in mmCIF format |
| clapack |
f2c'ed version of LAPACK |
| clashscore-db |
Clashscore-db for clashlist |
| clblas |
Library containing BLAS routines for OpenCL |
| clblast |
Tuned OpenCL BLAS |
| fflas-ffpack |
Library for dense linear algebra over word-size finite fields |
| fplll |
Different implementations of the floating-point LLL reduction algorithm |
| gamer |
Geometry-preserving Adaptive MeshER |
| cgnslib |
CFD General Notation System standard library |
| brial |
A C++ library for polynomials over boolean rings |
| btf |
Algorithm for matrix permutation into block triangular form |
| camd |
Library to order a sparse matrix prior to Cholesky factorization |
| cantera |
Object-oriented tool suite for chemical kinetics, thermodynamics, and transport |
| cartopy |
Python package for geospatial data processing and analysis |
| fcl |
The Flexible Collision Library |
| gaul-devel |
Genetic Algorithm Utility Library |
| getdata |
Reference implementation of the Dirfile, format for time-ordered binary data |
| dealii |
Solving partial differential equations with the finite element method |
| dmlc-core |
Common bricks library for building distributed machine learning. |
| dsdp |
Software for interior-point for semidefinite programming |
| exodusii |
Model developed to store and retrieve transient data for finite element analyses |
| gsl |
The GNU Scientific Library |
| ginkgo |
Numerical linear algebra software package |
| gdal |
Translator library for raster geospatial data formats (includes OGR support) |
| geos |
Geometry engine library for Geographic Information Systems |
| gerris |
Gerris Flow Solver |
| h5hut |
High-Performance I/O Library for Particle-based Simulations |
| h5part |
Portable High Performance Parallel Data Interface to HDF5 |
| hdf |
General purpose library and format for storing scientific data |
| hdf5 |
General purpose library and file format for storing scientific data |
| htslib |
C library for high-throughput sequencing data formats |
| indilib |
INDI Astronomical Control Protocol library |
| hypre |
Parallel matrix preconditioners library |
| idlcoyote |
GDL library from D. Fannings IDL courses |
| idlmarkwardt |
Craig Markwardt IDL procedures (MPFIT, CMSVLIB, etc) |
| ignition-common |
Set of libraries designed to rapidly develop robot applications |
| ignition-fuel-tools |
Classes and tools for interacting with Ignition Fuel |
| ignition-math |
A small, fast, and high performance math library for robot applications |
| iml |
Integer Matrix Library |
| inchi |
Program and library for generating standard and non-standard InChI and InChIKeys |
| io_lib |
General purpose trace and experiment file reading/writing interface |
| ipopt |
Interior-Point Optimizer for large-scale nonlinear optimization |
| itpp |
C++ library of mathematical, signal processing and communication |
| jama |
Java-like matrix C++ templates |
| keras-applications |
Keras deep learning library reference implementations of deep learning models |
| keras-preprocessing |
Easy data preprocessing and data augmentation for deep learning models |
| kim-api |
Application Programming Interface for atomistic simulations |
| ldl |
Simple but educational LDL^T matrix factorization algorithm |
| libgeotiff |
Library for reading TIFF files with embedded tags for geographic information |
| libh2o |
Library of routines for IF97 water & steam properties |
| libsc |
Support for parallel scientific applications |
| libsigrok |
Basic hardware drivers for logic analyzers and input/output file format support |
| libsigrokdecode |
Provide (streaming) protocol decoding functionality |
| libsvm |
Library for Support Vector Machines |
| libticables2 |
Library to handle different link cables for TI calculators |
| amd |
Library to order a sparse matrix prior to Cholesky factorization |
| armadillo |
Streamlined C++ linear algebra library |
| arpack |
Arnoldi package library to solve large scale eigenvalue problems |
| arprec |
Arbitrary precision float arithmetics and functions |
| atlas |
Automatically Tuned Linear Algebra Software |
| avogadrolibs |
Advanced molecule editor and visualizer 2 - libraries |
| beagle |
Open BEAGLE, a versatile EC/GA/GP framework |
| blas-reference |
Basic Linear Algebra Subprograms F77 reference implementations |
| bliss |
Compute Automorphism Groups and Canonical Labelings of Graphs |
| buddy |
Binary Decision Diagram Package |
| mumps |
MUltifrontal Massively Parallel sparse direct matrix Solver |
| nanoflann |
C++ header-only library for Nearest Neighbor (NN) search wih KD-trees |
| neartree |
Function library efficiently solving the Nearest Neighbor Problem |
| cbflib |
Library providing a simple mechanism for accessing CBF files and imgCIF files |
| cblas-reference |
C wrapper interface to the F77 reference BLAS implementation |
| ccfits |
C++ interface for cfitsio |
| ccolamd |
Constrained Column approximate minimum degree ordering algorithm |
| cdd+ |
Another implementation of the double description method |
| cddlib |
C library implementing the Double Description Method |
| cdf |
Common Data Format I/O library for multi-dimensional data sets |
| ceres-solver |
Nonlinear least-squares minimizer |
| cfitsio |
C and Fortran library for manipulating FITS files |
| cgcode |
Conjugate gradient Codes for large sparse linear systems |
| cln |
Class library (C++) for numbers |
| coinor-smi |
COIN-OR Stochastic modelling interface |
| coinor-symphony |
COIN-OR solver for mixed-integer linear programs |
| coinor-utils |
COIN-OR Matrix, Vector and other utility classes |
| coinhsl |
HSL mathematical software library for IPOPT |
| coinor-alps |
COIN-OR Framework for implementing parallel graph search algorithms |
| coinor-bcp |
COIN-OR Branch-Cut-Price Framework |
| coinor-blis |
COIN-OR BiCePS Linear Integer Solver |
| coinor-bonmin |
COIN-OR Basic Open-source Nonlinear Mixed INteger programming |
| coinor-cbc |
COIN-OR branch-and-cut mixed integer program solver |
| coinor-cgl |
COIN-OR cut-generation library |
| coinor-couenne |
COIN-OR Convex Over and Under ENvelopes for Nonlinear Estimation |
| coinor-csdp |
COIN-OR C Library for Semi-Definite Programming |
| coinor-dip |
COIN-OR Decomposition in Integer Programming library |
| coinor-dylp |
COIN-OR dynamic simplex linear program solver |
| coinor-flopcpp |
COIN-OR algebraic modeling language for linear optimization |
| coinor-mp |
COIN-OR lightweight API for COIN-OR libraries CLP, CBC, and CGL |
| coinor-netlib |
COIN-OR netlib models |
| coinor-os |
COIN-OR Optimization Services |
| coinor-osi |
COIN-OR Open Solver Interface |
| coinor-sample |
COIN-OR Sample models |
| coinor-vol |
COIN-OR volume algorithm linear program solver |
| colamd |
Column approximate minimum degree ordering algorithm |
| colpack |
C++ algorithms for specialized vertex coloring problems |
| cqrlib |
Utility library for quaternion arithmetic / rotation math (ANSI C implemented) |
| cxsparse |
Extended sparse matrix package |
| dcmtk |
The DICOM Toolkit |
| djbfft |
Extremely fast library for floating-point convolution |
| dlib |
Numerical and networking C++ library |
| eccodes |
A set of encoding/decoding APIs and tools for WMO GRIB, BUFR, and GTS messages |
| proj |
PROJ coordinate transformation software |
| punc |
Portable Understructure for Numerical Computing |
| givaro |
C++ library for arithmetic and algebraic computations |
| gmsh |
A three-dimensional finite element mesh generator |
| gts |
GNU Triangulated Surface Library |
| qrupdate |
Library for updating of QR and Cholesky decompositions |
| rosetta-db |
Essential database for rosetta |
| rosetta-fragments |
Fragment library for rosetta |
| rtabmap |
Real-Time Appearance-Based Mapping (RGB-D Graph SLAM) |
| scalapack |
Subset of LAPACK routines redesigned for heterogenous (MPI) computing |
| scikits |
Common files for python scikits |
| scikits_image |
Image processing routines for SciPy |
| scikits_learn |
Python modules for machine learning and data mining |
| scikits_optimization |
Python module for numerical optimization |
| scikits_timeseries |
SciPy module for manipulating, reporting, and plotting time series |
| scipy-python2 |
Scientific algorithms library for Python (py2 version) |
| scipy |
Scientific algorithms library for Python |
| libaec |
Adaptive Entropy Coding library |
| libbraiding |
Expose the functionality of cbraid as a shared library |
| libbufr |
ECMWF BUFR library - includes both C and Fortran example utilities |
| libccd |
Library for collision detection between two convex shapes |
| libcerf |
Efficient and accurate implementation of complex error functions |
| libcmatrix |
lite version of pNMRsim |
| libexcelformat |
reading, writing, and editing of XLS (BIFF8 format) files using C++ |
| libgenome |
Library for sci-biology/mauve |
| suitesparseconfig |
Common configurations for all packages in suitesparse |
| sundials |
Suite of nonlinear solvers |
| superlu |
Sparse LU factorization library |
| superlu_mt |
Multithreaded sparse LU factorization library |
| symengine |
Fast symbolic manipulation library, written in C++ |
| symmetrica |
C library for representation theory, combinatorics, and more |
| libtifiles2 |
Library for TI calculator files |
| libxc |
A library of exchange-correlation functionals for use in DFT |
| linbox |
C++ template library for integer and finite-field linear algebra |
| linux-gpib-modules |
Kernel modules for GPIB (IEEE 488.2) hardware |
| linux-gpib |
Driver library for GPIB (IEEE 488.2) hardware |
| lis |
Library of Iterative Solvers for Linear Systems |
| lmfit |
library for Levenberg-Marquardt least-squares minimization and curve fitting |
| lrslib |
Self-contained C implementation of the reverse search algorithm |
| m4rie |
Fast dense matrix arithmetic over GF(2^e) for 2 <= e <= 16 |
| magma |
Matrix Algebra on GPU and Multicore Architectures |
| med |
Modeling and Exchange of Data library |
| metis |
A package for unstructured serial graph partitioning |
| minfx |
Numerical optimisation library |
| mkl-rt |
Intel Math Kernel Library (Runtime) |
| mpir |
Library for arbitrary precision integer arithmetic (fork of gmp) |
| szip |
Extended-Rice lossless compression algorithm implementation |
| ta-lib |
Technical Analysis Library for analyzing financial markets trends |
| tensorflow-estimator |
A high-level TensorFlow API that greatly simplifies machine learning programming |
| tensorflow |
Computation framework using data flow graphs for scalable machine learning |
| tnt |
Template Numerical Toolkit: C++ headers for array and matrices |
| orocos_kdl |
Kinematics and Dynamics Library (KDL) |
| p4est |
Scalable Algorithms for Parallel Adaptive Mesh Refinement on Forests of Octrees |
| parmetis |
Parallel (MPI) unstructured graph partitioning library |
| pastix |
Parallel solver for very large sparse linear systems |
| pcl |
2D/3D image and point cloud processing |
| pgplot |
FORTRAN/C device-independent scientific graphic library |
| plplot |
Multi-language scientific plotting library |
| primegen |
Small, fast library to generate primes in order |
| profnet |
Neural network architecture for profacc |
| trilinos |
Scientific library collection for large scale problems |
| vtk |
The Visualization Toolkit |
| xdmf2 |
eXtensible Data Model and Format |
| xdrfile |
Library to read gromacs trajectory and topology files |
| xgks-pmel |
PMEL fork of XGKS, an X11-based version of the ANSI Graphical Kernel System |
| xkaapi |
Kernel for Adaptative, Asynchronous Parallel and Interactive programming |
| xylib |
Experimental x-y data reading library |
| spglib |
Spglib is a C library for finding and handling crystal symmetries |
| spqr |
Multithreaded multifrontal sparse QR factorization library |
| spr |
Statistical analysis and machine learning library |
Packages